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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809708.1_cds_XP_016495896.1_10171
CDS Infomation

[gene=LOC107814906] [db_xref=GeneID:107814906] [protein=UPF0235 protein At5g63440-like isoform X1] [protein_id=XP_016495896.1] [location=join(6004..6118,6849..6963,7535..7688,7959..8055,8713..8801,8911..8979,9354..9413)] [gbkey=CDS]
Sequence

ATGCCGAAAAGGACAACGCACACATACTCGAGCGAGGATGCAGTTACCGACGGTCAAAAC
TCCGATCTCTTTGTCTATTACTGCAAACACTGCAGTTCTCACGTCCTCATCTCCGATAAT
CAATTGCAGAAAATGCCAAAAAGGAAAACCGACAAAGCATATGTATTGGATAAAGAAAAG
TATCTTGCAAGACTGAGTGTAGATGATGCGGGGAAAGTTCTTCTAAAGCGTGGTGAAGGG
AAACTGGAGAAGCAGTTTCGGATGTCCTGTAAGGGTTGTGGCCTGTTTGTCTGCTACCGG
TCAGAAGAAGATCTGGAGACTGCCTCCTTCATATATGTAGTTGATGGTGCACTTAGTACT
ATTGCCGCTGAGACAAATCCACAGGATGCTCCTGTACCGCCCTGCATTTCTCAGTTAGAA
GGTGGCCTTGTGCAAGTGGCAATAGAAGTCGAGGACCGTGCCCAACGGTCAGCAATTACA
AGAGTAAATGCAGATGATGTTCGGGTCACTGTATCCGCACCTGCAGCTCGTGGAGAAGCT
AACAATGAACTTATGGAATTCATGGGTCGAGTACTGGGTCTGAAACTATCTCAGATGACT
CTCCAAAGAGGGTGGAATAGCAAATCAAAGCTTCTTGTAGTGGAGGATTTGACAGCTAGA
CAAGTATATGAGAAACTCTTGGAAGCTGCCCAACCTTGA

Peptide Sequence

PEP ID

XP_016495896.1
PEP Infomation

PREDICTED: UPF0235 protein At5g63440-like isoform X1 [Nicotiana tabacum]
Sequence

MPKRTTHTYSSEDAVTDGQNSDLFVYYCKHCSSHVLISDNQLQKMPKRKTDKAYVLDKEK
YLARLSVDDAGKVLLKRGEGKLEKQFRMSCKGCGLFVCYRSEEDLETASFIYVVDGALST
IAAETNPQDAPVPPCISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVSAPAARGEA
NNELMEFMGRVLGLKLSQMTLQRGWNSKSKLLVVEDLTARQVYEKLLEAAQP

Transcript Sequence

Gene sequence data has not been registered.